Drug sensitivity prediction
Drug sensitivity prediction.
Categories:
Classic paper
Barretina J et al. The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity. Nature 483:603 (2012).
Abstract - What is the study about and why was it performed?
What is a cancer cell line? See
Which genomic profiles were generated?
Are cell lines good models for real tumours? Figure 1.
What are pharmacological profiles, how is drug sensitivity measured?
What is predictive modelling, how were robust models derived, what is shown in Figure 2?
Reading assignment
Ghandi, M., Huang, F.W., Jané-Valbuena, J. et al. Next-generation characterization of the Cancer Cell Line Encyclopedia. Nature 569, 503–508 (2019).
Last modified May 30, 2023: update Gaussian processes (ff6a6c2)